Quick Links:
User Guide
Situs Flavors
Upcoming Events:
NYSBC Course 16, New York
Past Events:
EMBO Course 14, Paris
EMBO Course 09, Grenoble
Biomachina 06, Houston
Situs Workshop 03, San Diego
Other Sites of Interest:
SBGrid Consortium
EM Software Wiki
Sculptor | VMD | Chimera
new Situs 2.8. The regular release is now more efficient and easier to compile under Linux, Macintosh, and Windows/Cygwin. The popular colores tool was ported to FFTW 3.3.4 making it about 2x faster, whereas the classic vector quantization tools quanpdb and quanvol were converted to dynamic memory allocation for computation of larger coarse-grained point clouds. In addition, to accompany our new paper on map and model assessment (Wriggers and He, 2015), you can also download a modified version of Situs that describes how the geometric feature tracking was computed.

Situs 2.7
introduced the voltrac utility for detecting filamentous densities (such as alpha-helices and actin filaments)  (Rusu and Wriggers, 2012, Rusu et al., 2012). We also included the new volfltr utility for denoising 3D maps and 2D image stacks (Starosolski et al., 2012) using a digital paths filtering approach. 

Situs 2.6 introduced:

Situs is an award-winning program package for the modeling of atomic resolution structures into low-resolution density maps e.g. from electron microscopy, tomography, or small angle X-ray scatteringSitus is an SBGrid supported application.

The software is copyrighted, (c) 1998-2016 under the terms of the legal statement in the distribution . Please send any inquiries, bug reports, etc. to situs >>at<< biomachina.org.

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