Quick Links:
Introduction
Download v. 2.7.2
User Guide
Tutorials
Methodology
References 
History
Situs Flavors
Past Events:
NYSBC Course, New York
EMBO Course 09, Grenoble
"Innovations 06", Houston
Situs Workshop 03, San Diego
Other Sites of Interest:
SBGrid Consortium
EM Software Wiki
Sculptor | VMD | Chimera
SAXS Info
Biomachina
new Situs 2.8 release information

To accompany our new paper on map and model assessment (Wriggers and He, 2015), you can download a modified version of Situs that describes how the data in Figure 3 was computed.

The complete release of Situs 2.8 is in progress and will be released shortly. If you are interested in helping us test the software installation, please write us at situs >>at<< biomachina.org to get an advance copy.

Situs now an SBGrid supported application.

Review article: Wriggers, 2012 describes many of the Situs conventions (such as correlation, resolution, map formats) and scripting enabled work flows.

Situs 2.7
introduced the voltrac utility for detecting filamentous densities (such as alpha-helices and actin filaments)  (Rusu and Wriggers, 2012, Rusu et al., 2012). We also included the new volfltr utility for denoising 3D maps and 2D image stacks (Starosolski et al., 2012) using a digital paths filtering approach. 

Situs 2.6 introduced:

Situs is an award-winning program package for the modeling of atomic resolution structures into low-resolution density maps e.g. from electron microscopy, tomography, or small angle X-ray scattering.

The software is copyrighted, (c) 1998-2015 under the terms of the legal statement in the distribution . Please send any inquiries, bug reports, etc. to situs >>at<< biomachina.org.

All materials on this site are copyrighted. Last update