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"Innovations 06", Houston
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new We have moved

Our lab has moved to Old Dominion University in Norfolk, Virginia. We are currently preparing a new service release of Situs with after some house cleaning. In particular, version 2.7.3 will be updated with the latest version of FFTW which provides about a factor 2 speedup for the colores tool. We expect the release to be posted here in early spring 2015.

Situs now an SBGrid supported application.

Review article: Wriggers, 2012 describes many of the Situs conventions (such as correlation, resolution, map formats) and scripting enabled work flows.

Situs 2.7
introduced the voltrac utility for detecting filamentous densities (such as alpha-helices and actin filaments)  (Rusu and Wriggers, 2012, Rusu et al., 2012). We also included the new volfltr utility for denoising 3D maps and 2D image stacks (Starosolski et al., 2012) using a digital paths filtering approach. 

Situs 2.6 introduced:

Situs is an award-winning program package for the modeling of atomic resolution structures into low-resolution density maps e.g. from electron microscopy, tomography, or small angle X-ray scattering.

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