References
  • Original article (Situs 1.0):
  • Willy Wriggers, Ronald A. Milligan, and J. Andrew McCammon. Situs: A Package for Docking Crystal Structures into Low-Resolution Maps from Electron Microscopy. J. Structural Biology, 1999, Vol. 125, pp. 185-195. [Abstract] [Article] [JSB Paper of the Year Award]

  • Vector quantization method:
  • Willy Wriggers, Ronald A. Milligan, Klaus Schulten, and J. Andrew McCammon. Self-Organizing Neural Networks Bridge the Biomolecular Resolution Gap. J. Molecular Biology, 1998, Vol. 284, pp. 1247-1254. [Abstract] [Article]

  • Situs 2.x, correlation-based docking:
  • Pablo Chacón and Willy Wriggers. Multi-Resolution Contour-Based Fitting of Macromolecular Structures. J. Mol. Biol., 2002, Vol 317, pp. 375-384. [Abstract] [Article] [Structure Paper Alert]

  • Application to SAXS:
  • Willy Wriggers and Pablo Chacón. Using Situs for the Registration of Protein Structures with Low-Resolution Bead Models from X-ray Solution Scattering. J. Appl. Cryst., 2001, Vol. 34, pp. 773-776. [Abstract] [Article] [Link]

  • Map editing, discrepancy mapping, docking algorithms:
  • Willy Wriggers and Pablo Chacón. Modeling Tricks and Fitting Techniques for Multi-Resolution Structures. Structure, 2001, Vol. 9, pp. 779-788. [1st Paragraph] [Article]

  • Flexible fitting:
Mirabela Rusu, Stefan Birmanns, and Willy Wriggers. Biomolecular Pleiomorphism Probed by Spatial Interpolation of Coarse Models. Bioinformatics, 2008, Vol. 24, pp. 2460-2466. [Abstract] [Article]

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